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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903481.1_cds_XP_016453555.1_47668
CDS Infomation

[gene=LOC107777902] [db_xref=GeneID:107777902] [protein=xylem cysteine proteinase 1-like] [protein_id=XP_016453555.1] [location=join(45985..46480,47011..47246,47594..47734,48091..48306)] [gbkey=CDS]
Sequence

ATGATCTCTATTACTAATCAAACACAAATGGCTTCATTCTCTTTTTCCAAGTTGTCATTT
CTCGCCTTGTTTTCTATATTATCTCTCGTGGCATGCACAACGTTTGCTCGCGATTTTTCC
ATCGTGGGATATTCCCCCGATGACTTGAATAGCATCGATAACCTTATCAATCTCTTCGAA
TCGTGGATGGAGAAACACAGCAAGATTTATGAGAGCATCGAAGAGAAGTTGCATAGGTTT
GAGATTTTCAGAGACAATTTGAAACACATTGATGAGAGGAATAAGATGGTTAGTAACTAT
TGGCTTGGTTTGAATGAGTTTGCTGATCTGAGCCATGACGAGTTCAAGAAGATGTATCTA
GGACTCCAAGTTCAACATGAGAGATCAGAATCCTCCACACAAGAATTCACCTATAGAGAT
TTTGTGGATTTGCCTAAGTCTATTGATTGGAGAAAGAAAGGTGCTGTGACTAATGTCAAG
AACCAGGGCTCATGTGGTAGTTGCTGGGCATTTTCAACGGTAGCAGCAGTAGAGGGCATA
AACCAAATAAGGACAAGGAATTTGACGTCCTTATCTGAACAAGAACTCATCGACTGTGAC
ACAAAATATAACAGTGGTTGCAATGGGGGCCTTATGGATTATGCTTTTCAATTTATTGTC
TCTCAAGGTGGTCTTCACAAGGAGGATGACTATCCTTATCTCATGGAAGAAGGCACTTGT
GATGAAAAGAGGGATGAATCTGAAGTGGTGACAATTGATGGTTACCGTGATGTGCCAGCG
AATGACGAACAAAGTCTATTGAAAGCTCTTGCAAACCAACCTTTGAGTGTGGCCATTGAG
GCTTCTGGCAGAGATTTTCAATTCTACAGTGGGGGTGTGTTTGATGGGCATTGTGGAAGT
GCATTGGATCATGGAGTGGCAGCAGTTGGATATGGATCCACAAAGGGGACAGACTATATC
ATTGTCAAGAACTCTTGGGGTCCCAAATGGGGAGAGAAAGGTTTCATTAGGATGAAGAGA
AACACAGGCAAGCCTGCAGGAATCTGTGGAATCAATAAGATGGCTTCTTTCCCTATCAAA
AAGAAATGA

Peptide Sequence

PEP ID

XP_016453555.1
PEP Infomation

PREDICTED: xylem cysteine proteinase 1-like [Nicotiana tabacum]
Sequence

MISITNQTQMASFSFSKLSFLALFSILSLVACTTFARDFSIVGYSPDDLNSIDNLINLFE
SWMEKHSKIYESIEEKLHRFEIFRDNLKHIDERNKMVSNYWLGLNEFADLSHDEFKKMYL
GLQVQHERSESSTQEFTYRDFVDLPKSIDWRKKGAVTNVKNQGSCGSCWAFSTVAAVEGI
NQIRTRNLTSLSEQELIDCDTKYNSGCNGGLMDYAFQFIVSQGGLHKEDDYPYLMEEGTC
DEKRDESEVVTIDGYRDVPANDEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGS
ALDHGVAAVGYGSTKGTDYIIVKNSWGPKWGEKGFIRMKRNTGKPAGICGINKMASFPIK
KK

Transcript Sequence

Gene sequence data has not been registered.